mdehoon > Algorithm-Cluster > Algorithm::Cluster

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Module Version: 1.52   Source  

NAME ^

Algorithm::Cluster - Perl interface to the C Clustering Library.

DESCRIPTION ^

This module is an interface to the C Clustering Library, a general purpose library implementing functions for hierarchical clustering (pairwise simple, complete, average, and centroid linkage), along with k-means and k-medians clustering, and 2D self-organizing maps. This library was developed at the Human Genome Center of the University of Tokyo. The C Clustering Library is distributed along with Cluster 3.0, an enhanced version of the famous Cluster program originally written by Michael Eisen while at Stanford University.

EXAMPLES ^

See the scripts in the examples subdirectory of the package.

CHANGES ^

TO DO ^

THANKS ^

Thanks to Michael Eisen, for creating the software packages Cluster and TreeView.

AUTHOR ^

John Nolan jpnolan@sonic.net 2003. Michiel de Hoon mdehoon "AT" gsc.riken.jp 2003-2010. Seiya Imoto imoto "AT" ims.u-tokyo.ac.jp 2003-2010. Satoru Miyano 2003-2010. A copyright statement is contained in the source code itself.

This module is a Perl wrapper for the C clustering library for cDNA microarray data, Copyright (C) 2002 Michiel Jan Laurens de Hoon.

See the source of Cluster.pm for a full copyright statement.

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