Bio::LITE::Taxonomy::RDP - Lightweight and efficient RDP taxonomic manager
use Bio::LITE::Taxonomy::RDP; my $taxRDP = Bio::LITE::Taxonomy::RDP->new ( bergeyXML => "/path/to/BergeyTrainingTree.xml", ); my @tax = $taxRDP->get_taxonomy (22075); my $level = $taxRDP->get_level_from_name("Bacillaceae 1");
This module provides easy and efficient access to the RDP taxonomy with minimal dependencies and without intermediary databases.
This module is not part of the Bioperl bundle.
Any comments or suggestions should be addressed to firstname.lastname@example.org
Copyright 2009 Miguel Pignatelli, all rights reserved.
This library is free software; you may redistribute it and/or modify it under the same terms as Perl itself.