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all_entities_Complex

Return all instances of the Complex entity.

A complex is a set of chemical reactions that act in concert to effect a role.

Example:

    all_entities_Complex -a 

would retrieve all entities of type Complex and include all fields in the entities in the output.

The Complex entity has the following relationship links:

HasStep ReactionRule
IsTriggeredBy Role

Command-Line Options

-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

name
msid
mod_date

Output Format

The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.