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query_entity_Reaction

Query the entity Reaction.

A reaction is a chemical process that converts one set of compounds (substrate) to another set (products).

Example:

    query_entity_Reaction -a 

The Reaction entity has the following relationship links:

Involves Reagent
IsDisplayedOn Diagram
IsRequiredBy Requirement
IsUsedAs ReactionRule
ParticipatesIn Scenario
RunsByDefaultIn Compartment
UsesAliasForReaction Source

Command-Line Options

-is field,value

Limit the results to entities where the given field has the given value.

-like field,value

Limit the results to entities where the given field is LIKE (in the sql sense) the given value.

-op operator,field,value

Limit the results to entities where the given field is related to the given value based on the given operator.

The operators supported are as follows. We provide text based alternatives to the comparison operators so that extra quoting is not required to keep the command-line shell from confusing them with shell I/O redirection operators.

< or lt
> or gt
<= or le
>= or ge
=
LIKE
-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

mod_date
name
msid
abbr
equation
reversibility

Output Format

The standard output is a tab-delimited file containing a column for each requested field.