Rutger Vos > Bio-Phylo-0.55 > Bio::Phylo::Unparsers::Hennig86

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Source   Latest Release: Bio-Phylo-0.58

NAME ^

Bio::Phylo::Unparsers::Hennig86 - Serializer used by Bio::Phylo::IO, no serviceable parts inside

DESCRIPTION ^

This module turns the supplied object into a Hennig86 string. The supplied object has to either be a Bio::Phylo::Matrices::Matrix object or a Bio::Phylo::Project object, whose first matrix is exported to Hennig86. In other words, this only works on things that are or contain character state matrices.

SEE ALSO ^

There is a mailing list at https://groups.google.com/forum/#!forum/bio-phylo for any user or developer questions and discussions.

Bio::Phylo::IO

The hennig86 unparser is called by the Bio::Phylo::IO object. Look there to learn how to unparse objects.

Bio::Phylo::Manual

Also see the manual: Bio::Phylo::Manual and http://rutgervos.blogspot.com.

Hennig86 file format

To learn more about the Hennig86 format, visit http://www.phylo.org/tools/hennig.html.

CITATION ^

If you use Bio::Phylo in published research, please cite it:

Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. http://dx.doi.org/10.1186/1471-2105-12-63

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