Finnigan::Reaction -- a decoder for Reaction, the container for precursor mass and fragmentation energy
use Finnigan; my $r = Finnigan::Reaction->decode(\*INPUT); say $r->precursor; say $r->enengy;
This object contains a couple of double-precision floating point numbers that define the precursor ion M/z and the energy of the fragmentation reaction.
There are other elements that currently remain unknown: a double (set to 1.0 in all observations) and a couple longs.
The constructor method
Get the precursor M/z
Get the fragmentation energy
Make a short text representation of the object (found inside Therom's "filter line")
Finnigan::ScanEvent
uf-trailer
Gene Selkov, <selkovjr@gmail.com>
Copyright (C) 2010 by Gene Selkov
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.10.0 or, at your option, any later version of Perl 5 you may have available.
To install Finnigan, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Finnigan
CPAN shell
perl -MCPAN -e shell install Finnigan
For more information on module installation, please visit the detailed CPAN module installation guide.