| This Release | GO-TermFinder-0.86 | [Download] [Browse] | 19 Nov 2009 | |||
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| Links | [ Discussion Forum ] [ View/Report Bugs (4) ] [ Dependencies ] [ Other Tools ] | |||||
| CPAN Testers | PASS (419) FAIL (45) UNKNOWN (31) [ View Reports ] [ Perl/Platform Version Matrix ] | |||||
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| License | open_source | |||||
| Special Files |
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| GO::AnnotatedGene | 0.11 | ||
| GO::Annotation | 0.11 | ||
| GO::AnnotationProvider | abstract base class defining interface for how Annotation information should be provided | 0.12 | |
| GO::AnnotationProvider::AnnotationParser | parses a gene annotation file | 0.15 | |
| GO::Node | provides information about a node in the Gene Ontology | 0.16 | |
| GO::OntologyProvider | abstract base class providing API for the provision on Gene Ontology information | 0.12 | |
| GO::OntologyProvider::OboParser | Provides API for retrieving data from Gene Ontology obo file. | 0.01 | |
| GO::OntologyProvider::OntologyParser | Provides API for retrieving data from Gene Ontology files | 0.15 | |
| GO::Reference | 0.1 | ||
| GO::TermFinder | identify GO nodes that annotate a group of genes with a significant p-value | 0.86 | |
| GO::TermFinder::Native | |||
| GO::TermFinderReport::Html | prints an html table of the results of GO::TermFinder | 0.12 | |
| GO::TermFinderReport::Text | prints results of GO::TermFinder as a text report | 0.1 | |
| GO::Utils::File | simply utility module for dealing with file parsing | 0.12 | |
| GO::Utils::General | provides some general utilities for clients of other GO classes | 0.11 | |
| GO::View | Creates a gif or png image for visualizing the GO DAG | 0.15 | |
| GO::View::GD | a helper class for GO::View to deal with the image | 0.11 |
