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Changes for version 0.11 - 2004-07-15

  • Updated the README to provide more clarity as to how to link genes to external URLs in GeneXplorer.
  • Modified makeMicroarrayDataset.pl to allow a user to provide a correlation cutoff.
  • Modified correlations.c to not limit the number of correlations to output for a given gene.

Modules

an abstraction to the files produced from clustering
abstraction to matrices of microarray data
abstraction to DataMatrix
abstraction to matrix that won't fit in memory
abstraction to cdtfile
abstraction to pcl file
abstraction to matrices that fit in memory
Creates an image from a microarray dataset
class for viewing clustered expression data over the web

Provides

in lib/Microarray/Config.pm
in lib/Microarray/DataMatrix/TabDelimitedDataMatrix.pm
in lib/Microarray/Utilities/Filesystem.pm