| This Release | Bio-MAGETAB-1.13 | [Download] [Browse] | 03 Sep 2010 | |||
| Latest Release | Bio-MAGETAB-1.27 | [Download] [Browse] | 23 Dec 2012 | |||
| Other Releases | ||||||
| Links | [ Discussion Forum ] [ View/Report Bugs ] [ Dependencies ] [ Other Tools ] | |||||
| CPAN Testers | PASS (79) FAIL (10) NA (1) [ View Reports ] [ Perl/Platform Version Matrix ] | |||||
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| License | The GNU General Public License, Version not specified | |||||
| Special Files |
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| Bio::MAGETAB | A data model and utility API for the MAGE-TAB format. | 1.13 | |
| Bio::MAGETAB::ArrayDesign | MAGE-TAB array design class | ||
| Bio::MAGETAB::Assay | MAGE-TAB assay class | ||
| Bio::MAGETAB::BaseClass | Abstract base class for all MAGE-TAB classes. | ||
| Bio::MAGETAB::Comment | MAGE-TAB user-defined comment class | ||
| Bio::MAGETAB::CompositeElement | MAGE-TAB composite element class | ||
| Bio::MAGETAB::Contact | MAGE-TAB contact class | ||
| Bio::MAGETAB::ControlledTerm | MAGE-TAB controlled term class | ||
| Bio::MAGETAB::Data | Abstract data class | ||
| Bio::MAGETAB::DataAcquisition | MAGE-TAB data acquisition class | ||
| Bio::MAGETAB::DataFile | MAGE-TAB data file class | ||
| Bio::MAGETAB::DataMatrix | MAGE-TAB data matrix class | ||
| Bio::MAGETAB::DatabaseEntry | MAGE-TAB database entry class | ||
| Bio::MAGETAB::DesignElement | Abstract design element class | ||
| Bio::MAGETAB::Edge | MAGE-TAB edge class | ||
| Bio::MAGETAB::Event | Abstract event class | ||
| Bio::MAGETAB::Extract | MAGE-TAB extract class | ||
| Bio::MAGETAB::Factor | MAGE-TAB experimental factor class | ||
| Bio::MAGETAB::FactorValue | MAGE-TAB experimental factor class | ||
| Bio::MAGETAB::Feature | MAGE-TAB feature class | ||
| Bio::MAGETAB::Investigation | MAGE-TAB investigation class | ||
| Bio::MAGETAB::LabeledExtract | MAGE-TAB labeled extract class | ||
| Bio::MAGETAB::Material | Abstract material class | ||
| Bio::MAGETAB::MatrixColumn | MAGE-TAB matrix column class | ||
| Bio::MAGETAB::MatrixRow | MAGE-TAB matrix row class | ||
| Bio::MAGETAB::Measurement | MAGE-TAB measurement class | ||
| Bio::MAGETAB::Node | Abstract node class | ||
| Bio::MAGETAB::Normalization | MAGE-TAB data acquisition class | ||
| Bio::MAGETAB::ParameterValue | MAGE-TAB parameter value class | ||
| Bio::MAGETAB::Protocol | MAGE-TAB protocol class | ||
| Bio::MAGETAB::ProtocolApplication | MAGE-TAB protocol application class | ||
| Bio::MAGETAB::ProtocolParameter | MAGE-TAB protocol parameter class | ||
| Bio::MAGETAB::Publication | MAGE-TAB publication class | ||
| Bio::MAGETAB::Reporter | MAGE-TAB reporter class | ||
| Bio::MAGETAB::SDRF | MAGE-TAB SDRF class | ||
| Bio::MAGETAB::SDRFRow | MAGE-TAB SDRF row class | ||
| Bio::MAGETAB::Sample | MAGE-TAB sample class | ||
| Bio::MAGETAB::Source | MAGE-TAB source class | ||
| Bio::MAGETAB::TermSource | MAGE-TAB term source class | ||
| Bio::MAGETAB::Types | custom data types for Bio::MAGETAB | ||
| Bio::MAGETAB::Util::Builder | A storage class used to track Bio::MAGETAB object creation. | ||
| Bio::MAGETAB::Util::DBLoader | A persistent storage class used to track Bio::MAGETAB object creation and insertion into a relational database. | ||
| Bio::MAGETAB::Util::Persistence | A Tangram-based object persistence class for MAGE-TAB. | ||
| Bio::MAGETAB::Util::Reader | A parser/validator for MAGE-TAB documents. | 1 | |
| Bio::MAGETAB::Util::Reader::ADF | ADF parser class. | ||
| Bio::MAGETAB::Util::Reader::DataMatrix | Data matrix parser class. | ||
| Bio::MAGETAB::Util::Reader::IDF | IDF parser class. | ||
| Bio::MAGETAB::Util::Reader::SDRF | SDRF parser class. | ||
| Bio::MAGETAB::Util::Reader::Tabfile | An abstract class providing methods for handling tab-delimited files. | ||
| Bio::MAGETAB::Util::Reader::TagValueFile | An abstract class providing methods for handling tab-delimited files. | ||
| Bio::MAGETAB::Util::RewriteAE | A utility class providing methods to correct some common errors in ArrayExpress MAGE-TAB documents. | ||
| Bio::MAGETAB::Util::Writer | Export of MAGE-TAB objects. | ||
| Bio::MAGETAB::Util::Writer::ADF | Export of MAGE-TAB ArrayDesign objects. | ||
| Bio::MAGETAB::Util::Writer::GraphViz | Visualization of MAGE-TAB objects. | ||
| Bio::MAGETAB::Util::Writer::IDF | Export of MAGE-TAB Investigation objects. | ||
| Bio::MAGETAB::Util::Writer::SDRF | Export of MAGE-TAB SDRF objects. | ||
| Bio::MAGETAB::Util::Writer::Tabfile | Abstract MAGE-TAB exporter class. |
