Tim Rayner > Bio-MAGETAB-1.27 > Bio::MAGETAB::Util::Reader::SDRF

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Source   Latest Release: Bio-MAGETAB-1.31

NAME ^

Bio::MAGETAB::Util::Reader::SDRF - SDRF parser class.

SYNOPSIS ^

 use Bio::MAGETAB::Util::Reader::SDRF;
 my $parser = Bio::MAGETAB::Util::Reader::SDRF->new({
     uri => $sdrf_filename,
 });
 my $sdrf = $parser->parse();

DESCRIPTION ^

This class is used to parse SDRF files. It can be used on its own, but more often you will want to use the main Bio::MAGETAB::Util::Reader class which handles extended parsing options more transparently.

ATTRIBUTES ^

See the TabFile class for superclass attributes.

magetab_object

A Bio::MAGETAB::SDRF object. This can either be set upon instantiation, or a new object will be created for you. It can be retrieved at any time using get_magetab_object.

METHODS ^

parse

Parse the SDRF pointed to by $self->get_uri(). Returns the Bio::MAGETAB::SDRF object updated with the SDRF contents.

SEE ALSO ^

Bio::MAGETAB::Util::Reader::Tabfile Bio::MAGETAB::Util::Reader Bio::MAGETAB::SDRF

AUTHOR ^

Tim F. Rayner <tfrayner@gmail.com>

LICENSE ^

This library is released under version 2 of the GNU General Public License (GPL).

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