
align2nex.pl - translate an alignment into NEXUS format using BioPerl

align2nex.pl [options] <infile>

Output the alignment in <infile> in NEXUS format. This is dependent on BioPerl AlignIO modules. I don't know how well it will work.

The format of the input file. One of { bl2seq, clustalw, emboss, fasta, mase, mega, meme, msf, nexus, pfam, phylip, prodom, psi, selex, stockholm }.
The name of the output file. Defaults to out.nex.
Print a brief help message and exits.
Print the manual page and exits.
Print the version information and exit.

$Id: align2nex.pl,v 1.6 2006/08/24 06:41:57 thladish Exp $

Arlin Stoltzfus (stoltzfu@umbi.umd.edu)