Build.PL
CHANGES
lib/Bio/ToolBox.pm
lib/Bio/ToolBox/big_helper.pm
lib/Bio/ToolBox/Data.pm
lib/Bio/ToolBox/Data/core.pm
lib/Bio/ToolBox/Data/file.pm
lib/Bio/ToolBox/Data/Feature.pm
lib/Bio/ToolBox/Data/Stream.pm
lib/Bio/ToolBox/GeneTools.pm
lib/Bio/ToolBox/db_helper.pm
lib/Bio/ToolBox/db_helper/alignment_callbacks.pm
lib/Bio/ToolBox/db_helper/bam.pm
lib/Bio/ToolBox/db_helper/bigbed.pm
lib/Bio/ToolBox/db_helper/bigwig.pm
lib/Bio/ToolBox/db_helper/constants.pm
lib/Bio/ToolBox/db_helper/config.pm
lib/Bio/ToolBox/db_helper/hts.pm
lib/Bio/ToolBox/db_helper/seqfasta.pm
lib/Bio/ToolBox/db_helper/useq.pm
lib/Bio/ToolBox/db_helper/wiggle.pm
lib/Bio/ToolBox/parser/gff.pm
lib/Bio/ToolBox/parser/ucsc.pm
lib/Bio/ToolBox/SeqFeature.pm
lib/Bio/ToolBox/utility.pm
LICENSE
MANIFEST			This list of files
META.json
META.yml
README
scripts/bam2wig.pl
scripts/data2bed.pl
scripts/data2fasta.pl
scripts/data2gff.pl
scripts/data2wig.pl
scripts/db_setup.pl
scripts/db_types.pl
scripts/get_binned_data.pl
scripts/get_datasets.pl
scripts/get_feature_info.pl
scripts/get_features.pl
scripts/get_gene_regions.pl
scripts/get_intersecting_features.pl
scripts/get_relative_data.pl
scripts/join_data_file.pl
scripts/manipulate_datasets.pl
scripts/merge_datasets.pl
scripts/pull_features.pl
scripts/split_data_file.pl
scripts/ucsc_table2gff3.pl
t/01.Data.t
t/02.DB.t
t/03.Bam-HTS.t
t/03.Bam-Samtools.t
t/04.BigBed.t
t/05.BigWig.t
t/06.BigWigSet.t
t/07.USeq.t
t/08.Wiggle.t
t/09.parser.t
t/10.GeneTools.t
t/Data/biotoolbox.cfg
t/Data/chrI.gff3
t/Data/ensemblSource.txt
t/Data/ensemblToGeneName.txt
t/Data/ensGene.txt
t/Data/sample.bed
t/Data/sample1.bam
t/Data/sample1.bam.bai
t/Data/sample1.bb
t/Data/sample2.bw
t/Data/sample2.gff3
t/Data/sample2.wib
t/Data/sample3/metadata.txt
t/Data/sample3/sample3_f.bw
t/Data/sample3/sample3_r.bw
t/Data/sample3.useq
t/Data/sequence.fa