Search results for "Bio::Root::Storable"

Bio::Root::Storable - Safely store/retrieve objects from disk River stage two • 60 direct dependents • 65 total dependents
33 ++

Generic module that allows objects to be safely stored/retrieved from disk. Can be inhereted by any BioPerl object. As it will not usually be the first class in the inheretence list, _initialise_storable() should be called during object instantiation...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution
  • Bio::Root::Root - implementation of Bio::Root::RootI interface
  • Bio::SeqFeature::Collection - A container class for SeqFeatures suitable for performing operations such as finding features within a range, that match a certain feature type, etc.

Data::Edit::Xml - Edit data held in the XML format. River stage one • 5 direct dependents • 6 total dependents
++

Edit data held in the XML format. Version 20201031. The following sections describe the methods in each functional area of this module. For an alphabetic listing of all methods by name see Index....

PRBRENAN/Data-Edit-Xml-20201031 - 31 Oct 2020 23:42:40 UTC - Search in distribution

go2fmt.pl River stage one • 1 direct dependent • 1 total dependent
1 ++

parses any GO/OBO style ontology file and writes out as a different format ARGUMENTS -e ERRFILE writes parse errors in XML - defaults to STDERR (there should be no parse errors in well formed files) -p FORMAT determines which parser to use; if left u...

CMUNGALL/go-perl-0.15 - 12 Jun 2013 16:22:41 UTC - Search in distribution
  • GO::Parser - parses all GO files formats and types

pod::INSTALL.MacOSX River stage zero No dependents
++

LDS/GBrowse-2.56 - 15 Jan 2017 21:29:11 UTC - Search in distribution

Bundle::BioPerl - A bundle to install external CPAN modules used by BioPerl 1.5.2 River stage zero No dependents
++

The BioPerl distribution from http://bioperl.org contains code and modules that may use or require additional 'external' perl modules for advanced functionality. Many of the external modules are not contained within the standard Perl distribution. Th...

CJFIELDS/Bundle-BioPerl-2.1.9 - 16 Jan 2015 20:05:40 UTC - Search in distribution

lib/FAST/Bio/Root/Root.pm River stage zero No dependents
3 ++

This is a hashref-based implementation of the FAST::Bio::Root::RootI interface. Most Bioperl objects should inherit from this. See the documentation for FAST::Bio::Root::RootI for most of the methods implemented by this module. Only overridden method...

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution
6 results (0.106 seconds)