Search results for "Bio::SeqFeature::SimilarityPair"
Bio::SeqFeature::SimilarityPair - Sequence feature based on the similarity of two sequences.
Lightweight similarity search result as a pair of Similarity features. This class inherits off Bio::SeqFeature::FeaturePair and therefore implements Bio::SeqFeatureI, whereas the two features of the pair are descendants of Bio::SeqFeature::Generic, w...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::Tools::Est2Genome - Parse est2genome output, makes simple Bio::SeqFeature::Generic objects
- Bio::Search::HSP::BlastHSP - Bioperl BLAST High-Scoring Pair object
- Bio::Search::HSP::PsiBlastHSP - Bioperl BLAST High-Scoring Pair object
- 7 more results from BioPerl »
FAST::Bio::SeqFeature::SimilarityPair - Sequence feature based on the similarity of two sequences.
Lightweight similarity search result as a pair of Similarity features. This class inherits off FAST::Bio::SeqFeature::FeaturePair and therefore implements FAST::Bio::SeqFeatureI, whereas the two features of the pair are descendants of FAST::Bio::SeqF...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::Search::HSP::HSPI - Interface for a High Scoring Pair in a similarity search result
- FAST::Bio::Search::HSP::GenericHSP - A "Generic" implementation of a High Scoring Pair
- FAST::Bio::Search::HSP::PullHSPI - FAST::Bio::Search::HSP::HSPI interface for pull parsers.
Bio::DB::GFF::Feature - A relative segment identified by a feature type
Bio::DB::GFF::Feature is a stretch of sequence that corresponding to a single annotation in a GFF database. It inherits from Bio::DB::GFF::RelSegment, and so has all the support for relative addressing of this class and its ancestors. It also inherit...
CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC - Search in distribution
Bio::Search::HSP::HMMERHSP - A HSP object for HMMER results
This object is a specialization of Bio::Search::HSP::GenericHSP....
CJFIELDS/Bio-SearchIO-hmmer-1.7.3 - 25 Sep 2018 00:26:52 UTC - Search in distribution
Bio::Graphics::Glyph::segments - The "segments" glyph
This glyph is used for drawing features that consist of discontinuous segments. Unlike "graded_segments" or "alignment", the segments are a uniform color and not dependent on the score of the segment. METHODS This module overrides the maxdepth() meth...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC - Search in distribution